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Jonas Warringer
Senior Lecturer
Department of Chemistry & Molecular BiologyAbout Jonas Warringer
Cellular molecules, such as DNA, RNA, and proteins change across generations, creating heritable differences between cells and organisms and driving adaptation. Cancer, infection and resistance to chemotherapy and antibiotics are direct medical consequences of this molecular evolution. We combine the principles of evolutionary biology, population genetics and molecular and cellular biology to understand the rates and impacts of single nucleotide and copy number variations, the importance of neutral evolution vs. natural selection, the genetic nature of complex traits, and how changes to nuclear and organellar genomes influence aging, cancer and resistance to chemotherapy and antimicrobials. We often work with model microbes, such as the baker's yeast Saccharomyces cerevisiae, and the bacterium Escherichia coli, which is commonly found in the lower intestine of warm-blooded organisms. Our activities are at the interface between experimental and computational biology and use data from whole genome sequencing and automated measurements of cell growth, together with computational analysis and modelling and molecular and cellular biology techniques.
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Karl Persson, Vanessa O. Onyema, Ijeoma Princess Nwafor, Kameshwara V. R. Peri, Chika Otti, Priscilla Nnaemeka, Chioma Onyishi, Sylvia Okoye, Anene Moneke, Onyetugo Amadi, Jonas Warringer, Cecilia Geijer
APPLIED AND ENVIRONMENTAL MICROBIOLOGY - 2024 -
Florian Borse, Dovydas KiÄŤiatovas, Teemu Kuosmanen, Mabel Vidal, Guillermo Cabrera-Vives, Johannes Cairns, Jonas Warringer, Ville Mustonen
PLoS computational biology - 2024 -
Payam Ghiaci, Paula Jouhten, Nikolay Martyushenko, Helena Roca-Mesa, Jennifer Vazquez, Dimitrios Konstantinidis, Simon Stenberg, Sergej Andrejev, Kristina Grkovska, Albert Mas, Gemma Beltran, Eivind Almaas, Kiran R. Patil, Jonas Warringer
MOLECULAR SYSTEMS BIOLOGY - 2024 -
Nicolo Tellini, Matteo De Chiara, Simone Mozzachiodi, Lorenzo Tattini, Chiara Vischioni, Elena S. Naumova, Jonas Warringer, Anders Bergstroem, Gianni Liti
NATURE ECOLOGY & EVOLUTION - 2024 -
Lars Gamfeldt, James Hagan, Anne Farewell, Martin Palm, Jonas Warringer, Fabian Roger
Oikos - 2023 -
Yves Schulze, Payam Ghiaci, Liqian Zhao, Marc Biver, Jonas Warringer, Montserrat Filella, Markus J. Tamás
Metallomics : integrated biometal science - 2023 -
J. Li, Simon Stenberg, J. X. Yue, E. Mikhalev, D. Thompson, Jonas Warringer, G. Liti
PLoS Genetics - 2023 -
Karl Persson, Simon Stenberg, Markus J. Tamás, Jonas Warringer
G3 (Bethesda, Md.) - 2022 -
Simon Stenberg, Jing Li, Arne B Gjuvsland, Karl Persson, Erik Demitz-Helin, Carles González Peña, Jia-Xing Yue, Ciaran Gilchrist, Timmy Ärengård, Payam Ghiaci, Lisa Larsson-Berglund, Martin Zackrisson, Silvana Smits, Johan Hallin, Johanna L Höög, Mikael Molin, Gianni Liti, Stig W Omholt, Jonas Warringer
eLife - 2022 -
M. De Chiara, B. P. Barré, Karl Persson, A. Irizar, C. Vischioni, S. Khaiwal, Simon Stenberg, Onyetugo Chioma Amadi, G. Žun, K. Doberšek, C. Taccioli, J. Schacherer, U. Petrovič, Jonas Warringer, G. Liti
Nature Ecology and Evolution - 2022 -
P. Jouhten, D. Konstantinidis, F. Pereira, S. Andrejev, K. Grkovska, S. Castillo, Payam Ghiaci, G. Beltran, E. Almaas, A. Mas, Jonas Warringer, R. Gonzalez, P. Morales, K. R. Patil
Molecular Systems Biology - 2022 -
L. Van Wonterghem, M. De Chiara, G. Liti, Jonas Warringer, Anne Farewell, N. Verstraeten, J. Michiels
Microorganisms - 2022 -
M. Herzog, Eliza Alonso-Perez, I. Salguero, Jonas Warringer, D. J. Adams, S. P. Jackson, F. Puddu
Nucleic acids research - 2021 -
Sam Benkwitz-Bedford, Martin Palm, Talip Yasir Demirtas, Ville Mustonen, Anne Farewell, Jonas Warringer, Leopold Parts, Danesh Moradigaravand
mSystems - 2021 -
S. Mozzachiodi, L. Tattini, A. Llored, A. Irizar, N. Skofljanc, M. D'Angiolo, M. De Chiara, B. P. Barre, J. X. Yue, A. Lutazi, S. Loeillet, R. Laureau, S. Marsit, S. Stenberg, B. Albaud, K. Persson, J. L. Legras, S. Dequin, Jonas Warringer, A. Nicolas, G. Liti
Nature Communications - 2021 -
R. Murphy, Martin Palm, V. Mustonen, Jonas Warringer, Anne Farewell, L. Parts, D. Moradigaravand
mSphere - 2021 -
Hanna Alalam, Fabrice Graf, Martin Palm, Marie Abadikhah, Martin Zackrisson, Jonas Boström, Alfred Fransson, Chris Hadjineophytou, Linnéa Persson, Simon Stenberg, Matilda Mattsson, Payam Ghiaci, Per Sunnerhagen, Jonas Warringer, Anne Farewell
mSystems - 2020 -
Mikael Molin, Katarina Logg, Kristofer Bodvard, Ken Peeters, Annabelle Forsmark, Friederike Roger, Anna Jörhov, Neha Mishra, Jean-Marc Billod, Sabiha Amir, Mikael Andersson, Leif A Eriksson, Jonas Warringer, Mikael Käll, Anders Blomberg
BMC biology - 2020 -
B. P. Barré, J. Hallin, J. X. Yue, Karl Persson, E. Mikhalev, A. Irizar, S. Holt, D. Thompson, M. Molin, Jonas Warringer, G. Liti
Genome research - 2020 -
M. D'Angiolo, M. De Chiara, J. X. Yue, A. Irizar, Simon Stenberg, Karl Persson, A. Llored, B. Barre, J. Schacherer, R. Marangoni, E. Gilson, Jonas Warringer, G. Liti
Nature - 2020 -
J. Li, I. Vázquez-GarcĂa, Karl Persson, A. González, J. X. Yue, B. BarrĂ©, M. N. Hall, A. Long, Jonas Warringer, V. Mustonen, G. Liti
Molecular biology and evolution - 2019 -
Fabrice Graf, Martin Palm, Jonas Warringer, Anne Farewell
Drug Development Research - 2019 -
Martin Palm, Fabrice Graf, Owens Uwangue, Marta Tous Mohedano, Daniel Jaén-Luchoro, Edward R.B. Moore, Jonas Warringer, Anne Farewell
International Symposium of the International Society for Plasmid Biology and other Mobile Genetic Elements - 2018 -
Fabrice Graf, Hanna Alalam, Martin Zackrisson, Martin Palm, Payam Ghiaci, Per Sunnerhagen, Jonas Warringer, Anne Farewell
International Symposium of the International Society for Plasmid Biology and other Mobile Genetic Elements - 2018 -
Danesh Moradigaravand, Martin Palm, Anne Farewell, Ville Mustonen, Jonas Warringer, Leopold Parts
PLoS computational biology - 2018 -
Hanna Alalam, Fabrice Graf, Martin Palm, Marie Abadikhah, Martin Zackrisson, Matilda Mattsson, Chris Hadjineophytou, Linnèa Persson, Simon Stenberg, Payam Ghiaci, Per Sunnerhagen, Jonas Warringer, Anne Farewell
BioRxiv - 2018 -
Jonas Warringer, G. Liti, Anders Blomberg
Cold Spring Harbor Protocols - 2017 -
Fabrice Graf, Hanna Alalam, Martin Zackrisson, Per Sunnerhagen, Jonas Warringer, Anne Farewell
7th Congress of European Microbiologists (FEMS 2017) - 2017 -
G. Liti, Jonas Warringer, Anders Blomberg
Cold Spring Harbor Protocols - 2017 -
G. Liti, Jonas Warringer, Anders Blomberg
Cold Spring Harbor Protocols - 2017 -
I. Vazquez-Garcia, F. Salinas, J. Li, A. Fischer, B. Barre, J. Hallin, A. Bergstrom, Eliza Alonso-Perez, Jonas Warringer, V. Mustonen, G. Liti
Cell Reports - 2017 -
Luciano Fernandez-Ricaud, Olga Kourtchenko, Martin Zackrisson, Jonas Warringer, Anders Blomberg
Bmc Bioinformatics - 2016 -
Alicia Gutiérrez, Marta Sancho, Gemma Beltran, José Manuel Guillamon, Jonas Warringer
Applied microbiology and biotechnology - 2016 -
Arne B Gjuvsland, Enikö Zörgö, Jeevan Ka Samy, Simon Stenberg, Ibrahim H Demirsoy, Francisco Roque, Ewa Maciaszczyk-Dziubinska, Magdalena Migocka, Eliza Alonso-Perez, Martin Zackrisson, Robert Wysocki, Markus J. Tamás, Inge Jonassen, Stig W Omholt, Jonas Warringer
Molecular systems biology - 2016 -
Martin Zackrisson, Johan Hallin, Lars-Göran Ottosson, Peter Dahl, Esteban Fernandez-Parada, Erik Ländström, Luciano Fernandez-Ricaud, Petra Kaferle, Andreas Skyman, Simon Stenberg, Stig Omholt, Uros Petrovic, Jonas Warringer, Anders Blomberg
G3: Genes, Genomes, Genetics - 2016 -
J. Hallin, K. Martens, A. I. Young, Martin Zackrisson, F. Salinas, L. Parts, Jonas Warringer, G. Liti
Nature Communications - 2016 -
JosĂ© GarcĂa-MartĂnez, Lidia Delgado-Ramos, Guillermo Ayala, Vicent Pelechano, Daniel A Medina, Fany Carrasco, RamĂłn González, Eduardo AndrĂ©s-LeĂłn, Lars Steinmetz, Jonas Warringer, Sebastián Chávez, JosĂ© E PĂ©rez-OrtĂn
Nucleic acids research - 2016 -
Kaspar Märtens, Johan Hallin, Jonas Warringer, Gianni Liti, Leopold Parts
Nature communications - 2016 -
G Liti, Jonas Warringer, Anders Blomberg
CSHL protocol series “Budding Yeast: A Laboratory Manual” - 2015 -
Sebastian Ibstedt, Simon Stenberg, Sara Bagés, Arne B Gjuvsland, Francisco Salinas, Olga Kourtchenko, Jeevan K A Samy, Anders Blomberg, Stig W Omholt, Gianni Liti, Gemma Beltran, Jonas Warringer
Molecular biology and evolution - 2015 -
A. Kohler, U. Böcker, V. Shapaval, Annabelle Forsmark, Mats X. Andersson, Jonas Warringer, H. Martens, S. W. Omholt, Anders Blomberg
PLoS ONE - 2015 -
Jonas Warringer, Anders Blomberg
Phenomics - 2014 -
Anders Bergström, Jared T Simpson, Francisco Salinas, Benjamin Barré, Leopold Parts, Amin Zia, Alex N Nguyen Ba, Alan M Moses, Edward J Louis, Ville Mustonen, Jonas Warringer, Richard Durbin, Gianni Liti
Molecular biology and evolution - 2014 -
William R A Brown, Geraint Thomas, Nicholas C O Lee, Martin Blythe, Gianni Liti, Jonas Warringer, Matthew W Loose
Proceedings of the National Academy of 91Ě˝»¨s of the United States of America - 2014 -
Enikö Zörgö, Karolina Chwialkowska, A. B. Gjuvsland, Elena Garre, Per Sunnerhagen, G. Liti, Anders Blomberg, S. W. Omholt, Jonas Warringer
PLoS Genetics - 2013 -
Francisco A Cubillos, Leopold Parts, Francisco Salinas, Anders Bergström, Eugenio Scovacricchi, Amin Zia, Christopher J R Illingworth, Ville Mustonen, Sebastian Ibstedt, Jonas Warringer, Edward J Louis, Richard Durbin, Gianni Liti
Genetics - 2013 -
Kristina Jansson, John Patrick Alao, kristina Viktorsson, Jonas Warringer, Rolf Lewensohn, Per Sunnerhagen
Environmental and Molecular Mutagenesis - 2013 -
A. Gutierrez, G. Beltran, Jonas Warringer, J. M. Guillamon
Plos One - 2013 -
Gianni Liti, Alex N Ba, Martin Blythe, Carolin A Müller, Anders Bergström, Francisco A Cubillos, Felix Dafhnis-Calas, Shima Khoshraftar, Sunir Malla, Neel Mehta, Cheuk C Siow, Jonas Warringer, Alan M Moses, Edward J Louis, Conrad A Nieduszynski
BMC genomics - 2013 -
Enikö Zörgö, Arne Gjuvsland, Francisco A Cubillos, Edward J Louis, Gianni Liti, Anders Blomberg, Stig W Omholt, Jonas Warringer
Molecular biology and evolution - 2012 -
Tahir Mehmood, Jonas Warringer, Lars Snipen, Solve Sæbø
BMC bioinformatics - 2012 -
Andrea Hodgins-Davis, Aleksandra B Adomas, Jonas Warringer, Jeffrey P Townsend
Genome Biology and Evolution - 2012 -
Francisco Salinas, Francisco A Cubillos, Daniela Soto, Verónica Garcia, Anders Bergström, Jonas Warringer, M Angélica Ganga, Edward J Louis, Gianni Liti, Claudio Martinez
PloS one - 2012 -
Tahir Mehmood, Jon Bohlin, Anja Bråthen Kristoffersen, Solve Sæbø, Jonas Warringer, Lars Snipen
BMC bioinformatics - 2012 -
Sebastian Ibstedt, Leopold Parts, Francisco Cubillos, Francisco Salinas, Eugenio Scovacicricchi, Chris Illingworth, Ville Mustonen, Jonas Warringer, Edward Louis, Richard Durbin, Gianni Liti
Experimental Approaches to Evolution and Ecology using Yeast (EMBO, Heidelberg, October 2012) - 2012 -
Eun-Hee Park, Fan Zhang, Jonas Warringer, Per Sunnerhagen, Alan G. Hinnebusch
BMC Genomics - 2011 -
Tahir Mehmood, Harald Martens, Solve Sæbø, Jonas Warringer, Lars Snipen
BMC bioinformatics - 2011 -
Tahir Mehmood, Harald Martens, Solve Sæbø, Jonas Warringer, Lars Snipen
Algorithms for Molecular Biology - 2011 -
Jonas Warringer, Enikö Zörgö, Francisco A Cubillos, Amin Zia, Arne Gjuvsland, Jared T Simpson, Annabelle Forsmark, Richard Durbin, Stig W Omholt, Edward J Louis, Gianni Liti, Alan Moses, Anders Blomberg
PLoS genetics - 2011 -
Francisco A Cubillos, Eleonora Billi, Enikö Zörgö, Leopold Parts, Patrick Fargier, Stig Omholt, Anders Blomberg, Jonas Warringer, Edward J Louis, Gianni Liti
Molecular ecology - 2011 -
William R A Brown, Gianni Liti, Carlos Rosa, Steve James, Ian Roberts, Vincent Robert, Neil Jolly, Wen Tang, Peter Baumann, Carter Green, Kristina Schlegel, Jonathan Young, Fabienne Hirchaud, Spencer Leek, Geraint Thomas, Anders Blomberg, Jonas Warringer
G3 (Bethesda, Md.) - 2011 -
Leopold Parts, Francisco A Cubillos, Jonas Warringer, Kanika Jain, Francisco Salinas, Suzannah J Bumpstead, Mikael Molin, Amin Zia, Jared T Simpson, Michael A Quail, Alan Moses, Edward J Louis, Richard Durbin, Gianni Liti
Genome research - 2011 -
Zhijian Li, Franco J Vizeacoumar, Sondra Bahr, Jingjing Li, Jonas Warringer, Frederick S Vizeacoumar, Renqiang Min, Benjamin Vandersluis, Jeremy Bellay, Michael Devit, James A Fleming, Andrew Stephens, Julian Haase, Zhen-Yuan Lin, Anastasia Baryshnikova, Hong Lu, Zhun Yan, Ke Jin, Sarah Barker, Alessandro Datti, Guri Giaever, Corey Nislow, Chris Bulawa, Chad L Myers, Michael Costanzo, Anne-Claude Gingras, Zhaolei Zhang, Anders Blomberg, Kerry Bloom, Brenda Andrews, Charles Boone
Nature biotechnology - 2011 -
Annabelle Forsmark, Guendalina Rossi, Ingrid Wadskog, Patrick Brennwald, Jonas Warringer, Lennart Adler
Traffic (Copenhagen, Denmark) - 2011 -
Roja Babazadeh, Soode Moghadas Jafari, Martin Zackrisson, Anders Blomberg, Stefan Hohmann, Jonas Warringer, Marcus Krantz
FEBS letters - 2011 -
Jonas Warringer, Malin Hult, Sergi Regot, Francesc Posas, Per Sunnerhagen
Molecular Biology of the Cell - 2010 -
Lars-Göran Ottosson, Katarina Logg, Sebastian Ibstedt, Per Sunnerhagen, Mikael Käll, Anders Blomberg, Jonas Warringer
Eukaryotic Cell - 2010 -
Claes Molin, Alexandra Jauhiainen, Jonas Warringer, Olle Nerman, Per Sunnerhagen
RNA - 2009 -
Marcus Krantz, Doryaneh Ahmadpour, Lars-Göran Ottosson, Jonas Warringer, Christian Waltermann, Bodil Nordlander, Edda Klipp, Anders Blomberg, Stefan Hohmann, Hiroaki Kitano
Molecular systems biology - 2009 -
Lars-Göran Ottosson, Marcus Krantz, Doryaneh Ahmadpour, Jonas Warringer, Christian Waltermann, Bodil Nordlander, Edda Klipp, Anders Blomberg, Stefan Hohmann, Hiroaki Kitano
Abstracts of the 24th International Conference on Yeast Genetics and Molecular Biology (Supplement to Yeast Volume 26 Issue S1), 25th International Conference on Yeast Genetics & Molecular Biology, July 19-24, Manchester, UK - 2009 -
Marcus Krantz, Doryaneh Ahmadpour, Lars-Göran Ottosson, Jonas Warringer, Christian Waltermann, Bodil Nordlander, Edda Klipp, Anders Blomberg, Stefan Hohmann, Hiroaki Kitano
10th International Conference on Systems Biology (ICSB2009) proceedings, 10th International Conference on Systems Biology (ICSB2009), Aug 30 - Sep 4, Stanford, California, USA - 2009 -
Aurélie Gombault, Jonas Warringer, Robert Caesar, Fabienne Godin, Béatrice Vallée, Michel Doudeau, Hélène Chautard, Anders Blomberg, Hélène Bénédetti
FEMS yeast research - 2009 -
Gianni Liti, David M Carter, Alan M Moses, Jonas Warringer, Leopold Parts, Stephen A James, Robert P Davey, Ian N Roberts, Austin Burt, Vassiliki Koufopanou, Isheng J Tsai, Casey M Bergman, Douda Bensasson, Michael J T O'Kelly, Alexander van Oudenaarden, David B H Barton, Elizabeth Bailes, Alex N Nguyen, Matthew Jones, Michael A Quail, Ian Goodhead, Sarah Sims, Frances Smith, Anders Blomberg, Richard Durbin, Edward J Louis
Nature - 2009 -
A Kohler, U Böcker, Jonas Warringer, Anders Blomberg, S W Omholt, E Stark, H Martens
Applied spectroscopy - 2009 -
Katarina Logg, Jonas Warringer, Sayed Hossein Hashemi, Mikael Käll, Anders Blomberg
BBA - Molecular Cell Research - 2008 -
Kristina Jansson, Jonas Warringer, Anne Farewell, Han-Oh Park, Kwang-Lae Hoe, Dong-Uk Kim, Jacqueline Hayles, Per Sunnerhagen
Mutation Research - 2008 -
Marcus Krantz, Lars-Göran Ottosson, Doryaneh Ahmadpour, Jonas Warringer, Christian Waltermann, Bodil Nordlander, Anders Blomberg, Stefan Hohmann, Hiroaki Kitano
2008 Yeast Genetics and Molecular Biology Meeting Program and Abstract Book, 2008 Yeast Genetics and Molecular Biology Meeting, July 22-27, 2008 - 2008 -
Marcus Krantz, Lars-Göran Ottosson, Doryaneh Ahmadpour, Jonas Warringer, Christian Waltermann, Bodil Nordlander, Anders Blomberg, Stefan Hohmann, Hiroaki Kitano
9th International Conference on Systems Biology (ICSB2008) proceedings, 9th International Conference on Systems Biology (ICSB2008), August 22-28, Gothenburg - 2008 -
Jonathan Esguerra, Jonas Warringer, Anders Blomberg
RNA - 2008 -
Jonas Warringer, Dragi Anevski, Beidong Liu, Anders Blomberg
BMC chemical biology - 2008 -
Lars-Göran Ottosson, Doryaneh Ahmadpour, Marcus Krantz, Jonas Warringer, Anders Blomberg, Hiroaki Kitano, Stefan Hohmann
ICSB 2007 Conference Proceedings, 8th International Conference on Systems Biology (ICSB2007), October 1-6, 2007 - 2007 -
Doryaneh Ahmadpour, Lars-Göran Ottosson, Marcus Krantz, Jonas Warringer, Anders Blomberg, Stefan Hohmann
FEBS-SysBio March 10-16, 2007- Gosau, Austria - 2007 -
Luciano Fernandez-Ricaud, Jonas Warringer, Elke Ericson, Kerstin Glaab, Pär Davidsson, Fabian Nilsson, Graham J.L. Kemp, Olle Nerman, Anders Blomberg
Nucleic Acids Research - 2007 -
Doryaneh Ahmadpour, Lars-Göran Ottosson, Marcus Krantz, Jonas Warringer, Anders Blomberg, Stefan Hohmann
YSBN Meeting Nov. 14-16, 2006- Vienna- Austria - 2006 -
Jonas Warringer, Anders Blomberg
Yeast - 2006 -
M. Österberg, Hyun Kim, Jonas Warringer, K. Melén, Anders Blomberg, G. von Heijne
PNAS - 2006 -
Jonas Warringer, Anders Blomberg
Bmc Evolutionary Biology - 2006 -
Robert Caesar, Jonas Warringer, Anders Blomberg
Eukaryotic Cell - 2006 -
Elke Ericson, Ilona Pylvänäinen, Luciano Fernandez-Ricaud, Olle Nerman, Jonas Warringer, Anders Blomberg
Molecular Genetics and Genomics - 2006 -
Luciano Fernandez-Ricaud, Jonas Warringer, Elke Ericson, Ilona Pylvänäinen, G. J. L. Kemp, Olle Nerman, Anders Blomberg
Nucleic Acids Research - 2005 -
Jonas Warringer, Elke Ericson, Luciano Fernandez, Olle Nerman, Anders Blomberg
Proceedings of Nationall Acadademy of 91Ě˝»¨ U S A - 2003